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Commit 546a622e authored by Mike Lynch's avatar Mike Lynch
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It's now emitting valid JSON-LD

parent 9a80be26
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defaults/context.json 0 → 100644
+ 2309
− 0
View file @ 546a622e
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lib/catalog.js
+ 38
− 15
View file @ 546a622e
......@@ -16,7 +16,9 @@ You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
const CONTEXT = { };
const CONTEXT = './defaults/context.json';
fs = require('fs-extra');
/* Convert metadata from a redbox data publication and
......@@ -32,9 +34,11 @@ const CONTEXT = { };
// "name": "University of Technology Sydney",
// }
function datapub2catalog(datapub, org) {
async function datapub2catalog(id, datapub, org) {
const context = await fs.readJson(CONTEXT);
const catalog = {
'@context': CONTEXT,
'@context': context,
'@graph': []
};
......@@ -51,13 +55,13 @@ function datapub2catalog(datapub, org) {
const files = attachments(datapub);
const graph = [
dataset(datapub, files, organisation),
dataset(id, datapub, organisation, files),
organisation,
funding(datapub),
about(datapub),
spatial(datapub),
temporal(datapub),
creators,
people,
licence(datapub),
citation(datapub),
files,
......@@ -69,8 +73,22 @@ function datapub2catalog(datapub, org) {
}
function dataset(datapub, files) {
function link_id(item) {
return { '@id': item['@id'] };
}
function dataset(id, datapub, organisation, files) {
return {
'@id': id,
'type': 'Dataset',
'name': datapub['title'],
'description': datapub['description'],
'Publisher': link_id(organisation),
'hasPart': files.map(link_id),
}
}
......@@ -116,14 +134,19 @@ function creators(datapub, organisation) {
}
const creators = datapub['creators'].map((p) => {
const id = p['orcid'] || p['email'] || p['text_full_name'];
return {
'@id': id,
'identifier': id,
'name': p['text_full_name'],
'familyName': p['family_name'],
'givenName': p['given_name'],
'email': p['email'],
'affiliation': { '@id': organisation['@id'] }
if( id ) {
return {
'@id': id,
'identifier': id,
'name': p['text_full_name'],
'familyName': p['family_name'],
'givenName': p['given_name'],
'email': p['email'],
'affiliation': link_id(organisation)
}
} else {
// warn for unidentifiable creators
return undefined;
}
})
......
package-lock.json
+ 379
− 0
View file @ 546a622e
......@@ -4,18 +4,71 @@
"lockfileVersion": 1,
"requires": true,
"dependencies": {
"ajv": {
"version": "5.5.2",
"resolved": "https://registry.npmjs.org/ajv/-/ajv-5.5.2.tgz",
"integrity": "sha1-c7Xuyj+rZT49P5Qis0GtQiBdyWU=",
"requires": {
"co": "^4.6.0",
"fast-deep-equal": "^1.0.0",
"fast-json-stable-stringify": "^2.0.0",
"json-schema-traverse": "^0.3.0"
}
},
"asn1": {
"version": "0.2.4",
"resolved": "https://registry.npmjs.org/asn1/-/asn1-0.2.4.tgz",
"integrity": "sha512-jxwzQpLQjSmWXgwaCZE9Nz+glAG01yF1QnWgbhGwHI5A6FRIEY6IVqtHhIepHqI7/kyEyQEagBC5mBEFlIYvdg==",
"requires": {
"safer-buffer": "~2.1.0"
}
},
"assert-plus": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/assert-plus/-/assert-plus-1.0.0.tgz",
"integrity": "sha1-8S4PPF13sLHN2RRpQuTpbB5N1SU="
},
"assertion-error": {
"version": "1.1.0",
"resolved": "https://registry.npmjs.org/assertion-error/-/assertion-error-1.1.0.tgz",
"integrity": "sha512-jgsaNduz+ndvGyFt3uSuWqvy4lCnIJiovtouQN5JZHOKCS2QuhEdbcQHFhVksz2N2U9hXJo8odG7ETyWlEeuDw==",
"dev": true
},
"asynckit": {
"version": "0.4.0",
"resolved": "https://registry.npmjs.org/asynckit/-/asynckit-0.4.0.tgz",
"integrity": "sha1-x57Zf380y48robyXkLzDZkdLS3k="
},
"aws-sign2": {
"version": "0.7.0",
"resolved": "https://registry.npmjs.org/aws-sign2/-/aws-sign2-0.7.0.tgz",
"integrity": "sha1-tG6JCTSpWR8tL2+G1+ap8bP+dqg="
},
"aws4": {
"version": "1.8.0",
"resolved": "https://registry.npmjs.org/aws4/-/aws4-1.8.0.tgz",
"integrity": "sha512-ReZxvNHIOv88FlT7rxcXIIC0fPt4KZqZbOlivyWtXLt8ESx84zd3kMC6iK5jVeS2qt+g7ftS7ye4fi06X5rtRQ=="
},
"balanced-match": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/balanced-match/-/balanced-match-1.0.0.tgz",
"integrity": "sha1-ibTRmasr7kneFk6gK4nORi1xt2c=",
"dev": true
},
"bcrypt-pbkdf": {
"version": "1.0.2",
"resolved": "https://registry.npmjs.org/bcrypt-pbkdf/-/bcrypt-pbkdf-1.0.2.tgz",
"integrity": "sha1-pDAdOJtqQ/m2f/PKEaP2Y342Dp4=",
"optional": true,
"requires": {
"tweetnacl": "^0.14.3"
}
},
"bindings": {
"version": "1.3.0",
"resolved": "https://registry.npmjs.org/bindings/-/bindings-1.3.0.tgz",
"integrity": "sha512-DpLh5EzMR2kzvX1KIlVC0VkC3iZtHKTgdtZ0a3pglBZdaQFjt5S9g9xd1lE+YvXyfd6mtCeRnrUfOLYiTMlNSw=="
},
"brace-expansion": {
"version": "1.1.11",
"resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-1.1.11.tgz",
......@@ -32,6 +85,11 @@
"integrity": "sha512-qhAVI1+Av2X7qelOfAIYwXONood6XlZE/fXaBSmW/T5SzLAmCgzi+eiWE7fUvbHaeNBQH13UftjpXxsfLkMpgw==",
"dev": true
},
"caseless": {
"version": "0.12.0",
"resolved": "https://registry.npmjs.org/caseless/-/caseless-0.12.0.tgz",
"integrity": "sha1-G2gcIf+EAzyCZUMJBolCDRhxUdw="
},
"chai": {
"version": "4.1.2",
"resolved": "https://registry.npmjs.org/chai/-/chai-4.1.2.tgz",
......@@ -61,6 +119,19 @@
"integrity": "sha1-V00xLt2Iu13YkS6Sht1sCu1KrII=",
"dev": true
},
"co": {
"version": "4.6.0",
"resolved": "https://registry.npmjs.org/co/-/co-4.6.0.tgz",
"integrity": "sha1-bqa989hTrlTMuOR7+gvz+QMfsYQ="
},
"combined-stream": {
"version": "1.0.6",
"resolved": "https://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz",
"integrity": "sha1-cj599ugBrFYTETp+RFqbactjKBg=",
"requires": {
"delayed-stream": "~1.0.0"
}
},
"commander": {
"version": "2.15.1",
"resolved": "http://registry.npmjs.org/commander/-/commander-2.15.1.tgz",
......@@ -73,6 +144,19 @@
"integrity": "sha1-2Klr13/Wjfd5OnMDajug1UBdR3s=",
"dev": true
},
"core-util-is": {
"version": "1.0.2",
"resolved": "https://registry.npmjs.org/core-util-is/-/core-util-is-1.0.2.tgz",
"integrity": "sha1-tf1UIgqivFq1eqtxQMlAdUUDwac="
},
"dashdash": {
"version": "1.14.1",
"resolved": "https://registry.npmjs.org/dashdash/-/dashdash-1.14.1.tgz",
"integrity": "sha1-hTz6D3y+L+1d4gMmuN1YEDX24vA=",
"requires": {
"assert-plus": "^1.0.0"
}
},
"debug": {
"version": "3.1.0",
"resolved": "https://registry.npmjs.org/debug/-/debug-3.1.0.tgz",
......@@ -91,18 +175,68 @@
"type-detect": "^4.0.0"
}
},
"delayed-stream": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/delayed-stream/-/delayed-stream-1.0.0.tgz",
"integrity": "sha1-3zrhmayt+31ECqrgsp4icrJOxhk="
},
"diff": {
"version": "3.5.0",
"resolved": "https://registry.npmjs.org/diff/-/diff-3.5.0.tgz",
"integrity": "sha512-A46qtFgd+g7pDZinpnwiRJtxbC1hpgf0uzP3iG89scHk0AUC7A1TGxf5OiiOUv/JMZR8GOt8hL900hV0bOy5xA==",
"dev": true
},
"ecc-jsbn": {
"version": "0.1.2",
"resolved": "https://registry.npmjs.org/ecc-jsbn/-/ecc-jsbn-0.1.2.tgz",
"integrity": "sha1-OoOpBOVDUyh4dMVkt1SThoSamMk=",
"optional": true,
"requires": {
"jsbn": "~0.1.0",
"safer-buffer": "^2.1.0"
}
},
"escape-string-regexp": {
"version": "1.0.5",
"resolved": "https://registry.npmjs.org/escape-string-regexp/-/escape-string-regexp-1.0.5.tgz",
"integrity": "sha1-G2HAViGQqN/2rjuyzwIAyhMLhtQ=",
"dev": true
},
"extend": {
"version": "3.0.2",
"resolved": "https://registry.npmjs.org/extend/-/extend-3.0.2.tgz",
"integrity": "sha512-fjquC59cD7CyW6urNXK0FBufkZcoiGG80wTuPujX590cB5Ttln20E2UB4S/WARVqhXffZl2LNgS+gQdPIIim/g=="
},
"extsprintf": {
"version": "1.3.0",
"resolved": "https://registry.npmjs.org/extsprintf/-/extsprintf-1.3.0.tgz",
"integrity": "sha1-lpGEQOMEGnpBT4xS48V06zw+HgU="
},
"fast-deep-equal": {
"version": "1.1.0",
"resolved": "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz",
"integrity": "sha1-wFNHeBfIa1HaqFPIHgWbcz0CNhQ="
},
"fast-json-stable-stringify": {
"version": "2.0.0",
"resolved": "https://registry.npmjs.org/fast-json-stable-stringify/-/fast-json-stable-stringify-2.0.0.tgz",
"integrity": "sha1-1RQsDK7msRifh9OnYREGT4bIu/I="
},
"forever-agent": {
"version": "0.6.1",
"resolved": "https://registry.npmjs.org/forever-agent/-/forever-agent-0.6.1.tgz",
"integrity": "sha1-+8cfDEGt6zf5bFd60e1C2P2sypE="
},
"form-data": {
"version": "2.3.2",
"resolved": "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz",
"integrity": "sha1-SXBJi+YEwgwAXU9cI67NIda0kJk=",
"requires": {
"asynckit": "^0.4.0",
"combined-stream": "1.0.6",
"mime-types": "^2.1.12"
}
},
"fs-extra": {
"version": "7.0.0",
"resolved": "https://registry.npmjs.org/fs-extra/-/fs-extra-7.0.0.tgz",
......@@ -125,6 +259,14 @@
"integrity": "sha1-6td0q+5y4gQJQzoGY2YCPdaIekE=",
"dev": true
},
"getpass": {
"version": "0.1.7",
"resolved": "https://registry.npmjs.org/getpass/-/getpass-0.1.7.tgz",
"integrity": "sha1-Xv+OPmhNVprkyysSgmBOi6YhSfo=",
"requires": {
"assert-plus": "^1.0.0"
}
},
"glob": {
"version": "7.1.2",
"resolved": "https://registry.npmjs.org/glob/-/glob-7.1.2.tgz",
......@@ -150,6 +292,20 @@
"integrity": "sha512-qBr4OuELkhPenW6goKVXiv47US3clb3/IbuWF9KNKEijAy9oeHxU9IgzjvJhHkUzhaj7rOUD7+YGWqUjLp5oSA==",
"dev": true
},
"har-schema": {
"version": "2.0.0",
"resolved": "https://registry.npmjs.org/har-schema/-/har-schema-2.0.0.tgz",
"integrity": "sha1-qUwiJOvKwEeCoNkDVSHyRzW37JI="
},
"har-validator": {
"version": "5.1.0",
"resolved": "https://registry.npmjs.org/har-validator/-/har-validator-5.1.0.tgz",
"integrity": "sha512-+qnmNjI4OfH2ipQ9VQOw23bBd/ibtfbVdK2fYbY4acTDqKTW/YDp9McimZdDbG8iV9fZizUqQMD5xvriB146TA==",
"requires": {
"ajv": "^5.3.0",
"har-schema": "^2.0.0"
}
},
"has-flag": {
"version": "3.0.0",
"resolved": "https://registry.npmjs.org/has-flag/-/has-flag-3.0.0.tgz",
......@@ -162,6 +318,16 @@
"integrity": "sha1-k0EP0hsAlzUVH4howvJx80J+I/0=",
"dev": true
},
"http-signature": {
"version": "1.2.0",
"resolved": "https://registry.npmjs.org/http-signature/-/http-signature-1.2.0.tgz",
"integrity": "sha1-muzZJRFHcvPZW2WmCruPfBj7rOE=",
"requires": {
"assert-plus": "^1.0.0",
"jsprim": "^1.2.2",
"sshpk": "^1.7.0"
}
},
"inflight": {
"version": "1.0.6",
"resolved": "https://registry.npmjs.org/inflight/-/inflight-1.0.6.tgz",
......@@ -178,6 +344,37 @@
"integrity": "sha1-Yzwsg+PaQqUC9SRmAiSA9CCCYd4=",
"dev": true
},
"is-typedarray": {
"version": "1.0.0",
"resolved": "https://registry.npmjs.org/is-typedarray/-/is-typedarray-1.0.0.tgz",
"integrity": "sha1-5HnICFjfDBsR3dppQPlgEfzaSpo="
},
"isstream": {
"version": "0.1.2",
"resolved": "https://registry.npmjs.org/isstream/-/isstream-0.1.2.tgz",
"integrity": "sha1-R+Y/evVa+m+S4VAOaQ64uFKcCZo="
},
"jsbn": {
"version": "0.1.1",
"resolved": "https://registry.npmjs.org/jsbn/-/jsbn-0.1.1.tgz",
"integrity": "sha1-peZUwuWi3rXyAdls77yoDA7y9RM=",
"optional": true
},
"json-schema": {
"version": "0.2.3",
"resolved": "https://registry.npmjs.org/json-schema/-/json-schema-0.2.3.tgz",
"integrity": "sha1-tIDIkuWaLwWVTOcnvT8qTogvnhM="
},
"json-schema-traverse": {
"version": "0.3.1",
"resolved": "https://registry.npmjs.org/json-schema-traverse/-/json-schema-traverse-0.3.1.tgz",
"integrity": "sha1-NJptRMU6Ud6JtAgFxdXlm0F9M0A="
},
"json-stringify-safe": {
"version": "5.0.1",
"resolved": "https://registry.npmjs.org/json-stringify-safe/-/json-stringify-safe-5.0.1.tgz",
"integrity": "sha1-Epai1Y/UXxmg9s4B1lcB4sc1tus="
},
"jsonfile": {
"version": "4.0.0",
"resolved": "https://registry.npmjs.org/jsonfile/-/jsonfile-4.0.0.tgz",
......@@ -186,6 +383,41 @@
"graceful-fs": "^4.1.6"
}
},
"jsonld": {
"version": "1.1.0",
"resolved": "https://registry.npmjs.org/jsonld/-/jsonld-1.1.0.tgz",
"integrity": "sha512-tx87xNtu2hGabr7mhSyXTI8q+Fz3pl+50B/JislFPwAz8ud0KTTQpNjU74tJIegFAHve9UFYzzj4YVTIrac0Hw==",
"requires": {
"rdf-canonize": "^0.2.1",
"request": "^2.83.0",
"semver": "^5.5.0",
"xmldom": "0.1.19"
}
},
"jsprim": {
"version": "1.4.1",
"resolved": "https://registry.npmjs.org/jsprim/-/jsprim-1.4.1.tgz",
"integrity": "sha1-MT5mvB5cwG5Di8G3SZwuXFastqI=",
"requires": {
"assert-plus": "1.0.0",
"extsprintf": "1.3.0",
"json-schema": "0.2.3",
"verror": "1.10.0"
}
},
"mime-db": {
"version": "1.36.0",
"resolved": "https://registry.npmjs.org/mime-db/-/mime-db-1.36.0.tgz",
"integrity": "sha512-L+xvyD9MkoYMXb1jAmzI/lWYAxAMCPvIBSWur0PZ5nOf5euahRLVqH//FKW9mWp2lkqUgYiXPgkzfMUFi4zVDw=="
},
"mime-types": {
"version": "2.1.20",
"resolved": "https://registry.npmjs.org/mime-types/-/mime-types-2.1.20.tgz",
"integrity": "sha512-HrkrPaP9vGuWbLK1B1FfgAkbqNjIuy4eHlIYnFi7kamZyLLrGlo2mpcx0bBmNpKqBtYtAfGbodDddIgddSJC2A==",
"requires": {
"mime-db": "~1.36.0"
}
},
"minimatch": {
"version": "3.0.4",
"resolved": "https://registry.npmjs.org/minimatch/-/minimatch-3.0.4.tgz",
......@@ -235,6 +467,21 @@
"integrity": "sha1-VgiurfwAvmwpAd9fmGF4jeDVl8g=",
"dev": true
},
"nan": {
"version": "2.11.0",
"resolved": "https://registry.npmjs.org/nan/-/nan-2.11.0.tgz",
"integrity": "sha512-F4miItu2rGnV2ySkXOQoA8FKz/SR2Q2sWP0sbTxNxz/tuokeC8WxOhPMcwi0qIyGtVn/rrSeLbvVkznqCdwYnw=="
},
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"version": "0.7.6",
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"integrity": "sha512-sol30LUpz1jQFBjOKwbjxijiE3b6pjd74YwfD0fJOKPjF+fONKb2Yg8rYgS6+bK6VDl+/wfr4IYpC7jDzLUIfw=="
},
"oauth-sign": {
"version": "0.9.0",
"resolved": "https://registry.npmjs.org/oauth-sign/-/oauth-sign-0.9.0.tgz",
"integrity": "sha512-fexhUFFPTGV8ybAtSIGbV6gOkSv8UtRbDBnAyLQw4QPKkgNlsH2ByPGtMUqdWkos6YCRmAqViwgZrJc/mRDzZQ=="
},
"once": {
"version": "1.4.0",
"resolved": "https://registry.npmjs.org/once/-/once-1.4.0.tgz",
......@@ -256,6 +503,95 @@
"integrity": "sha1-uULm1L3mUwBe9rcTYd74cn0GReA=",
"dev": true
},
"performance-now": {
"version": "2.1.0",
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"integrity": "sha1-wNWmOycYgArY4esPpSachN1BhF4="
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"har-validator": "~5.1.0",
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},
"semver": {
"version": "5.5.1",
"resolved": "https://registry.npmjs.org/semver/-/semver-5.5.1.tgz",
"integrity": "sha512-PqpAxfrEhlSUWge8dwIp4tZnQ25DIOthpiaHNIthsjEFQD6EvqUKUDM7L8O2rShkFccYo1VjJR0coWfNkCubRw=="
},
"sshpk": {
"version": "1.14.2",
"resolved": "https://registry.npmjs.org/sshpk/-/sshpk-1.14.2.tgz",
"integrity": "sha1-xvxhZIo9nE52T9P8306hBeSSupg=",
"requires": {
"asn1": "~0.2.3",
"assert-plus": "^1.0.0",
"bcrypt-pbkdf": "^1.0.0",
"dashdash": "^1.12.0",
"ecc-jsbn": "~0.1.1",
"getpass": "^0.1.1",
"jsbn": "~0.1.0",
"safer-buffer": "^2.0.2",
"tweetnacl": "~0.14.0"
}
},
"supports-color": {
"version": "5.4.0",
"resolved": "https://registry.npmjs.org/supports-color/-/supports-color-5.4.0.tgz",
......@@ -265,6 +601,29 @@
"has-flag": "^3.0.0"
}
},
"tough-cookie": {
"version": "2.4.3",
"resolved": "https://registry.npmjs.org/tough-cookie/-/tough-cookie-2.4.3.tgz",
"integrity": "sha512-Q5srk/4vDM54WJsJio3XNn6K2sCG+CQ8G5Wz6bZhRZoAe/+TxjWB/GlFAnYEbkYVlON9FMk/fE3h2RLpPXo4lQ==",
"requires": {
"psl": "^1.1.24",
"punycode": "^1.4.1"
}
},
"tunnel-agent": {
"version": "0.6.0",
"resolved": "https://registry.npmjs.org/tunnel-agent/-/tunnel-agent-0.6.0.tgz",
"integrity": "sha1-J6XeoGs2sEoKmWZ3SykIaPD8QP0=",
"requires": {
"safe-buffer": "^5.0.1"
}
},
"tweetnacl": {
"version": "0.14.5",
"resolved": "https://registry.npmjs.org/tweetnacl/-/tweetnacl-0.14.5.tgz",
"integrity": "sha1-WuaBd/GS1EViadEIr6k/+HQ/T2Q=",
"optional": true
},
"type-detect": {
"version": "4.0.8",
"resolved": "https://registry.npmjs.org/type-detect/-/type-detect-4.0.8.tgz",
......@@ -276,11 +635,31 @@
"resolved": "https://registry.npmjs.org/universalify/-/universalify-0.1.2.tgz",
"integrity": "sha512-rBJeI5CXAlmy1pV+617WB9J63U6XcazHHF2f2dbJix4XzpUF0RS3Zbj0FGIOCAva5P/d/GBOYaACQ1w+0azUkg=="
},
"uuid": {
"version": "3.3.2",
"resolved": "https://registry.npmjs.org/uuid/-/uuid-3.3.2.tgz",
"integrity": "sha512-yXJmeNaw3DnnKAOKJE51sL/ZaYfWJRl1pK9dr19YFCu0ObS231AB1/LbqTKRAQ5kw8A90rA6fr4riOUpTZvQZA=="
},
"verror": {
"version": "1.10.0",
"resolved": "https://registry.npmjs.org/verror/-/verror-1.10.0.tgz",
"integrity": "sha1-OhBcoXBTr1XW4nDB+CiGguGNpAA=",
"requires": {
"assert-plus": "^1.0.0",
"core-util-is": "1.0.2",
"extsprintf": "^1.2.0"
}
},
"wrappy": {
"version": "1.0.2",
"resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz",
"integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=",
"dev": true
},
"xmldom": {
"version": "0.1.19",
"resolved": "https://registry.npmjs.org/xmldom/-/xmldom-0.1.19.tgz",
"integrity": "sha1-Yx/Ad3bv2EEYvyUXGzftTQdaCrw="
}
}
}
package.json
+ 2
− 1
View file @ 546a622e
......@@ -14,7 +14,8 @@
"license": "GPL-3.0",
"repository": "https://code.research.uts.edu.au/eresearch/datacrate",
"dependencies": {
"fs-extra": "^7.0.0"
"fs-extra": "^7.0.0",
"jsonld": "^1.1.0"
},
"devDependencies": {
"chai": "^4.1.2",
......
test/catalog.spec.js
+ 4
− 1
View file @ 546a622e
......@@ -34,11 +34,14 @@ const ORG = {
'name': 'University of Technology Sydney'
};
const DATASET_ID = 'https://data.research.uts.edu.au/public/XYZ';
describe("ReDBox data publication to DataCrate catalog.json", () => {
it("Can run at all ", async () => {
const dp = await fs.readJson('./test_data/datapub.json');
const cj = catalog.datapub2catalog(dp, ORG);
const cj = await catalog.datapub2catalog(DATASET_ID, dp, ORG);
console.log(JSON.stringify(cj, null, 2));
assert(cj, "Got something back")
});
......
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