From 22a6af406fdc98a153a933db28cff690707e03c1 Mon Sep 17 00:00:00 2001 From: Raymond Chia <rqchia@janus0.ihpc.uts.edu.au> Date: Tue, 28 Nov 2023 17:30:28 +1100 Subject: [PATCH] median fs --- logs/singularity_3017003.out | 539 +++++++ logs/singularity_3032252.out | 1032 +++++++++++++ logs/singularity_3996020.out | 1296 +++++++++++++++++ logs/singularity_4028191.out | 767 ++++++++++ .../digitalsignalprocessing.cpython-38.pyc | Bin 27238 -> 27254 bytes regress_rr.py | 169 ++- 6 files changed, 3778 insertions(+), 25 deletions(-) create mode 100644 logs/singularity_3017003.out create mode 100644 logs/singularity_3032252.out create mode 100644 logs/singularity_3996020.out create mode 100644 logs/singularity_4028191.out diff --git a/logs/singularity_3017003.out b/logs/singularity_3017003.out new file mode 100644 index 0000000..fe1a5ff --- /dev/null +++ b/logs/singularity_3017003.out @@ -0,0 +1,539 @@ +2023-11-28 10:58:32.977686: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations. +To enable the following instructions: AVX2 AVX512F FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags. +Using TensorFlow backend +Namespace(data_input='imu-bvp', feature_method='None', lbl_str='pss', model='cnn1d', overwrite=0, subject=3, test_standing=1, train_len=5, win_shift=0.2, win_size=12) +Using pre-set data id: 1 +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-15.0 +train +(36036, 11) +test +(287283, 10) +---CNN1D--- +2023-11-28 11:01:19.316912: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:21.859053: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:21.859313: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +input shape: (1440, 7) +x shape: (121, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-15.0/bayesianoptimization/tuner0.json +{'n_layers': 5, 'filter_unit0': 128, 'filter_unit1': 128, 'filter_unit2': 256, 'filter_unit3': 128, 'filter_unit4': 128, 'kernel_size0': 5, 'kernel_size1': 5, 'kernel_size2': 4, 'kernel_size3': 2, 'kernel_size4': 4, 'pool_size0': 2, 'pool_size1': 1, 'pool_size2': 2, 'pool_size3': 4, 'pool_size4': 3, 'stride_size0': 2, 'stride_size1': 3, 'stride_size2': 3, 'stride_size3': 2, 'stride_size4': 2, 'dropout0': 0.1, 'dropout1': 0.30000000000000004, 'dropout2': 0.4, 'dropout3': 0.4, 'dropout4': 0.2} +2023-11-28 11:01:22.280589: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:22.280820: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:22.280967: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:39.319477: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:39.319742: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:39.319904: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:39.320037: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1639] Created device /job:localhost/replica:0/task:0/device:GPU:0 with 14720 MB memory: -> device: 0, name: Quadro RTX 5000, pci bus id: 0000:0b:00.0, compute capability: 7.5 +2023-11-28 11:02:06.937297: I tensorflow/compiler/xla/stream_executor/cuda/cuda_dnn.cc:432] Loaded cuDNN version 8600 + 1/31 [..............................] - ETA: 22:15 13/31 [===========>..................] - ETA: 0s 26/31 [========================>.....] - ETA: 0s 31/31 [==============================] - ETA: 0s 31/31 [==============================] - 45s 6ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +QStandardPaths: XDG_RUNTIME_DIR points to non-existing path '/run/user/56779', please create it with 0700 permissions. +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-17.0 +train +(35916, 11) +test +(287283, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 128, 'kernel_size0': 4, 'pool_size0': 4, 'stride_size0': 2, 'dropout0': 0.30000000000000004} + 1/31 [..............................] - ETA: 5s 27/31 [=========================>....] - ETA: 0s 31/31 [==============================] - 0s 2ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-20.0 +train +(36036, 11) +test +(287283, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (116, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-12.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 2, 'filter_unit0': 64, 'filter_unit1': 32, 'kernel_size0': 3, 'kernel_size1': 4, 'pool_size0': 5, 'pool_size1': 5, 'stride_size0': 5, 'stride_size1': 5, 'dropout0': 0.0, 'dropout1': 0.1} + 1/31 [..............................] - ETA: 7s 31/31 [==============================] - ETA: 0s 31/31 [==============================] - 0s 2ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-15.0-17.0 +train +(36036, 11) +test +(287283, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (116, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 4, 'filter_unit0': 128, 'filter_unit1': 64, 'filter_unit2': 128, 'filter_unit3': 256, 'kernel_size0': 3, 'kernel_size1': 3, 'kernel_size2': 5, 'kernel_size3': 5, 'pool_size0': 5, 'pool_size1': 3, 'pool_size2': 3, 'pool_size3': 1, 'stride_size0': 2, 'stride_size1': 1, 'stride_size2': 5, 'stride_size3': 2, 'dropout0': 0.30000000000000004, 'dropout1': 0.4, 'dropout2': 0.0, 'dropout3': 0.1} + 1/31 [..............................] - ETA: 13s 16/31 [==============>...............] - ETA: 0s 31/31 [==============================] - ETA: 0s 31/31 [==============================] - 1s 5ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-15.0-20.0 +train +(36156, 11) +test +(287283, 10) +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.37 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.37 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.38 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.38 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.39 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.39 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.40 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.40 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.41 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.41 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.42 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.42 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.43 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.43 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.44 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.44 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +---CNN1D--- +input shape: (1440, 7) +x shape: (111, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-15.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 3, 'pool_size0': 1, 'stride_size0': 3, 'dropout0': 0.1} + 1/31 [..............................] - ETA: 4s 31/31 [==============================] - 0s 1ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-17.0-20.0 +train +(36036, 11) +test +(287283, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (116, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-10.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 4, 'filter_unit0': 128, 'filter_unit1': 64, 'filter_unit2': 128, 'filter_unit3': 256, 'kernel_size0': 3, 'kernel_size1': 3, 'kernel_size2': 5, 'kernel_size3': 5, 'pool_size0': 5, 'pool_size1': 3, 'pool_size2': 3, 'pool_size3': 1, 'stride_size0': 2, 'stride_size1': 1, 'stride_size2': 5, 'stride_size3': 2, 'dropout0': 0.30000000000000004, 'dropout1': 0.4, 'dropout2': 0.0, 'dropout3': 0.1} + 1/31 [..............................] - ETA: 12s 15/31 [=============>................] - ETA: 0s 29/31 [===========================>..] - ETA: 0s 31/31 [==============================] - ETA: 0s 31/31 [==============================] - 1s 5ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot03_id1_combi5.0-7.0-12.0-15.0-17.0 +train +(36036, 11) +test +(287283, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (116, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot03/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot03_id1_combi5.0-7.0-12.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 4, 'filter_unit0': 32, 'filter_unit1': 128, 'filter_unit2': 256, 'filter_unit3': 256, 'kernel_size0': 2, 'kernel_size1': 4, 'kernel_size2': 2, 'kernel_size3': 5, 'pool_size0': 1, 'pool_size1': 1, 'pool_size2': 3, 'pool_size3': 2, 'stride_size0': 3, 'stride_size1': 5, 'stride_size2': 1, 'stride_size3': 5, 'dropout0': 0.30000000000000004, 'dropout1': 0.2, 'dropout2': 0.0, 'dropout3': 0.1} +2023-11-28 11:03:00.566638: W tensorflow/core/framework/op_kernel.cc:1828] OP_REQUIRES failed at conv_ops_impl.h:359 : INVALID_ARGUMENT: input depth must be evenly divisible by filter depth: 32 vs 128 +Traceback (most recent call last): + File "regress_rr.py", line 1402, in <module> + sens_rr_model(subject, + File "regress_rr.py", line 1298, in sens_rr_model + preds = model.predict(x_test) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 70, in error_handler + raise e.with_traceback(filtered_tb) from None + File "/home/rqchia/.local/lib/python3.8/site-packages/tensorflow/python/eager/execute.py", line 53, in quick_execute + tensors = pywrap_tfe.TFE_Py_Execute(ctx._handle, device_name, op_name, +tensorflow.python.framework.errors_impl.InvalidArgumentError: Graph execution error: + +Detected at node 'cnn1d/conv1d_2/Conv1D' defined at (most recent call last): + File "regress_rr.py", line 1402, in <module> + sens_rr_model(subject, + File "regress_rr.py", line 1298, in sens_rr_model + preds = model.predict(x_test) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 65, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 2554, in predict + tmp_batch_outputs = self.predict_function(iterator) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 2341, in predict_function + return step_function(self, iterator) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 2327, in step_function + outputs = model.distribute_strategy.run(run_step, args=(data,)) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 2315, in run_step + outputs = model.predict_step(data) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 2283, in predict_step + return self(x, training=False) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 65, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/training.py", line 569, in __call__ + return super().__call__(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 65, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/base_layer.py", line 1150, in __call__ + outputs = call_fn(inputs, *args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 96, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/sequential.py", line 405, in call + return super().call(inputs, training=training, mask=mask) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/functional.py", line 512, in call + return self._run_internal_graph(inputs, training=training, mask=mask) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/functional.py", line 669, in _run_internal_graph + outputs = node.layer(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 65, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/engine/base_layer.py", line 1150, in __call__ + outputs = call_fn(inputs, *args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/utils/traceback_utils.py", line 96, in error_handler + return fn(*args, **kwargs) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/layers/convolutional/base_conv.py", line 290, in call + outputs = self.convolution_op(inputs, self.kernel) + File "/home/rqchia/.local/lib/python3.8/site-packages/keras/src/layers/convolutional/base_conv.py", line 262, in convolution_op + return tf.nn.convolution( +Node: 'cnn1d/conv1d_2/Conv1D' +input depth must be evenly divisible by filter depth: 32 vs 128 + [[{{node cnn1d/conv1d_2/Conv1D}}]] [Op:__inference_predict_function_5657] +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).layer_with_weights-4.kernel +Value in checkpoint could not be found in the restored object: (root).layer_with_weights-4.kernel +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).layer_with_weights-4.bias +Value in checkpoint could not be found in the restored object: (root).layer_with_weights-4.bias +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 diff --git a/logs/singularity_3032252.out b/logs/singularity_3032252.out new file mode 100644 index 0000000..6186568 --- /dev/null +++ b/logs/singularity_3032252.out @@ -0,0 +1,1032 @@ +2023-11-28 11:11:29.134200: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations. +To enable the following instructions: AVX2 AVX512F FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags. +Using TensorFlow backend +Namespace(data_input='imu-bvp', feature_method='minirocket', lbl_str='pss', model='ard', overwrite=0, subject=3, test_standing=1, train_len=5, win_shift=0.2, win_size=12) +Using pre-set data id: 0 +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-12.0-15.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 +590 Pilot03 0 ard ... -2.132250 -0.030804 0.335888 + +[591 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-12.0-17.0 +train +(35916, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 +590 Pilot03 0 ard ... -2.132250 -0.030804 0.335888 +591 Pilot02 0 ard ... -4.077427 0.064294 0.023235 +592 Pilot03 0 ard ... -3.425517 -0.064052 0.045220 + +[593 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-12.0-20.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +590 Pilot03 0 ard ... -2.132250 -0.030804 3.358884e-01 +591 Pilot02 0 ard ... -4.077427 0.064294 2.323462e-02 +592 Pilot03 0 ard ... -3.425517 -0.064052 4.521989e-02 +593 Pilot02 0 ard ... -10.781425 0.157570 2.252345e-08 +594 Pilot03 0 ard ... -2.288029 -0.161926 3.560296e-07 + +[595 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-15.0-17.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +591 Pilot02 0 ard ... -4.077427 0.064294 2.323462e-02 +592 Pilot03 0 ard ... -3.425517 -0.064052 4.521989e-02 +593 Pilot02 0 ard ... -10.781425 0.157570 2.252345e-08 +594 Pilot03 0 ard ... -2.288029 -0.161926 3.560296e-07 +595 Pilot03 0 ard ... -4.288878 -0.062862 4.937947e-02 + +[596 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-15.0-20.0 +train +(36156, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +593 Pilot02 0 ard ... -10.781425 0.157570 2.252345e-08 +594 Pilot03 0 ard ... -2.288029 -0.161926 3.560296e-07 +595 Pilot03 0 ard ... -4.288878 -0.062862 4.937947e-02 +596 Pilot02 0 ard ... -5.979400 0.116184 3.940064e-05 +597 Pilot03 0 ard ... -3.718349 0.022220 4.876224e-01 + +[598 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-10.0-17.0-20.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +595 Pilot03 0 ard ... -4.288878 -0.062862 0.049379 +596 Pilot02 0 ard ... -5.979400 0.116184 0.000039 +597 Pilot03 0 ard ... -3.718349 0.022220 0.487622 +598 Pilot02 0 ard ... -9.467720 0.128383 0.000005 +599 Pilot03 0 ard ... -2.929493 -0.081395 0.010883 + +[600 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-12.0-15.0-17.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +597 Pilot03 0 ard ... -3.718349 0.022220 0.487622 +598 Pilot02 0 ard ... -9.467720 0.128383 0.000005 +599 Pilot03 0 ard ... -2.929493 -0.081395 0.010883 +600 Pilot02 0 ard ... -2.573563 -0.029604 0.296408 +601 Pilot03 0 ard ... -1.971946 -0.147921 0.000003 + +[602 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-12.0-15.0-20.0 +train +(36156, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +598 Pilot02 0 ard ... -9.467720 0.128383 0.000005 +599 Pilot03 0 ard ... -2.929493 -0.081395 0.010883 +600 Pilot02 0 ard ... -2.573563 -0.029604 0.296408 +601 Pilot03 0 ard ... -1.971946 -0.147921 0.000003 +602 Pilot03 0 ard ... -3.705609 -0.005145 0.872339 + +[603 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-12.0-17.0-20.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +600 Pilot02 0 ard ... -2.573563 -0.029604 0.296408 +601 Pilot03 0 ard ... -1.971946 -0.147921 0.000003 +602 Pilot03 0 ard ... -3.705609 -0.005145 0.872339 +603 Pilot02 0 ard ... -3.621093 0.101044 0.000354 +604 Pilot03 0 ard ... -2.325423 -0.022527 0.481634 + +[605 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-7.0-15.0-17.0-20.0 +train +(36156, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +602 Pilot03 0 ard ... -3.705609 -0.005145 0.872339 +603 Pilot02 0 ard ... -3.621093 0.101044 0.000354 +604 Pilot03 0 ard ... -2.325423 -0.022527 0.481634 +605 Pilot02 0 ard ... -6.231645 0.127397 0.000006 +606 Pilot03 0 ard ... -2.660972 -0.000374 0.990671 + +[607 rows x 18 columns] +imu-bvp_rr_Pilot03_id0_combi5.0-10.0-12.0-15.0-17.0 +train +(36036, 11) +test +(287283, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) diff --git a/logs/singularity_3996020.out b/logs/singularity_3996020.out new file mode 100644 index 0000000..0632579 --- /dev/null +++ b/logs/singularity_3996020.out @@ -0,0 +1,1296 @@ +2023-11-28 10:58:08.232204: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations. +To enable the following instructions: AVX2 AVX512F FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags. +Using TensorFlow backend +Namespace(data_input='imu-bvp', feature_method='None', lbl_str='pss', model='cnn1d', overwrite=0, subject=2, test_standing=1, train_len=5, win_shift=0.2, win_size=12) +Using pre-set data id: 1 +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-15.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +2023-11-28 11:01:45.247087: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:46.045215: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:46.045605: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +input shape: (1440, 7) +x shape: (120, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-15.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 4, 'pool_size0': 1, 'stride_size0': 4, 'dropout0': 0.4} +2023-11-28 11:01:46.479957: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:46.480395: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:46.480670: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:48.695219: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:48.695621: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:48.695901: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:995] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355 +2023-11-28 11:01:48.696118: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1639] Created device /job:localhost/replica:0/task:0/device:GPU:0 with 14720 MB memory: -> device: 0, name: Quadro RTX 5000, pci bus id: 0000:0b:00.0, compute capability: 7.5 +2023-11-28 11:02:07.725989: I tensorflow/compiler/xla/stream_executor/cuda/cuda_dnn.cc:432] Loaded cuDNN version 8600 + 1/39 [..............................] - ETA: 22:49 14/39 [=========>....................] - ETA: 0s 29/39 [=====================>........] - ETA: 0s 39/39 [==============================] - 36s 4ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-17.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 3, 'filter_unit0': 32, 'filter_unit1': 32, 'filter_unit2': 32, 'kernel_size0': 5, 'kernel_size1': 1, 'kernel_size2': 4, 'pool_size0': 3, 'pool_size1': 1, 'pool_size2': 5, 'stride_size0': 3, 'stride_size1': 2, 'stride_size2': 1, 'dropout0': 0.2, 'dropout1': 0.30000000000000004, 'dropout2': 0.2} + 1/39 [..............................] - ETA: 24s 19/39 [=============>................] - ETA: 0s 38/39 [============================>.] - ETA: 0s 39/39 [==============================] - 1s 4ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-12.0-20.0/bayesianoptimization/tuner0.json +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +{'n_layers': 1, 'filter_unit0': 256, 'kernel_size0': 4, 'pool_size0': 5, 'stride_size0': 5, 'dropout0': 0.4} + 1/39 [..............................] - ETA: 12s 16/39 [===========>..................] - ETA: 0s 31/39 [======================>.......] - ETA: 0s 39/39 [==============================] - 0s 4ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-15.0-17.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 5, 'pool_size0': 3, 'stride_size0': 1, 'dropout0': 0.0} + 1/39 [..............................] - ETA: 11s 21/39 [===============>..............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-15.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-15.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 1, 'pool_size0': 4, 'stride_size0': 4, 'dropout0': 0.0} + 1/39 [..............................] - ETA: 10s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-10.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 2, 'pool_size0': 2, 'stride_size0': 1, 'dropout0': 0.30000000000000004} + 1/39 [..............................] - ETA: 11s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-15.0-17.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 128, 'kernel_size0': 4, 'pool_size0': 4, 'stride_size0': 4, 'dropout0': 0.30000000000000004} + 1/39 [..............................] - ETA: 11s 22/39 [===============>..............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-15.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-15.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 2, 'filter_unit0': 32, 'filter_unit1': 32, 'kernel_size0': 1, 'kernel_size1': 1, 'pool_size0': 3, 'pool_size1': 2, 'stride_size0': 4, 'stride_size1': 3, 'dropout0': 0.4, 'dropout1': 0.30000000000000004} + 1/39 [..............................] - ETA: 16s 21/39 [===============>..............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-12.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 32, 'kernel_size0': 3, 'pool_size0': 3, 'stride_size0': 2, 'dropout0': 0.30000000000000004} + 1/39 [..............................] - ETA: 10s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +imu-bvp_rr_Pilot02_id1_combi5.0-7.0-15.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-7.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 32, 'kernel_size0': 5, 'pool_size0': 1, 'stride_size0': 2, 'dropout0': 0.4} + 1/39 [..............................] - ETA: 10s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - 0s 2ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-15.0-17.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 4, 'filter_unit0': 32, 'filter_unit1': 128, 'filter_unit2': 256, 'filter_unit3': 256, 'kernel_size0': 2, 'kernel_size1': 4, 'kernel_size2': 2, 'kernel_size3': 5, 'pool_size0': 1, 'pool_size1': 1, 'pool_size2': 3, 'pool_size3': 2, 'stride_size0': 3, 'stride_size1': 5, 'stride_size2': 1, 'stride_size3': 5, 'dropout0': 0.30000000000000004, 'dropout1': 0.2, 'dropout2': 0.0, 'dropout3': 0.1} + 1/39 [..............................] - ETA: 32s 18/39 [============>.................] - ETA: 0s 35/39 [=========================>....] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 5ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-15.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-15.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 128, 'kernel_size0': 2, 'pool_size0': 5, 'stride_size0': 1, 'dropout0': 0.2} + 1/39 [..............................] - ETA: 11s 20/39 [==============>...............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.29 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.30 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.31 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.32 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.33 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.34 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.35 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.36 +imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-10.0-12.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 3, 'filter_unit0': 32, 'filter_unit1': 32, 'filter_unit2': 32, 'kernel_size0': 3, 'kernel_size1': 2, 'kernel_size2': 1, 'pool_size0': 3, 'pool_size1': 1, 'pool_size2': 5, 'stride_size0': 4, 'stride_size1': 1, 'stride_size2': 4, 'dropout0': 0.1, 'dropout1': 0.1, 'dropout2': 0.30000000000000004} + 1/39 [..............................] - ETA: 22s 19/39 [=============>................] - ETA: 0s 38/39 [============================>.] - ETA: 0s 39/39 [==============================] - 1s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-10.0-15.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (110, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-10.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 3, 'pool_size0': 3, 'stride_size0': 5, 'dropout0': 0.2} + 1/39 [..............................] - ETA: 10s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 0s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi5.0-12.0-15.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi5.0-12.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 64, 'kernel_size0': 4, 'pool_size0': 2, 'stride_size0': 4, 'dropout0': 0.30000000000000004} + 1/39 [..............................] - ETA: 10s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - 0s 2ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-15.0-17.0 +train +(35920, 11) +test +(364536, 10) +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +---CNN1D--- +input shape: (1440, 7) +x shape: (120, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-15.0-17.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 256, 'kernel_size0': 4, 'pool_size0': 3, 'stride_size0': 4, 'dropout0': 0.1} + 1/39 [..............................] - ETA: 11s 16/39 [===========>..................] - ETA: 0s 31/39 [======================>.......] - ETA: 0s 39/39 [==============================] - 0s 4ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-15.0-20.0 +train +(35920, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-15.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 1, 'filter_unit0': 32, 'kernel_size0': 5, 'pool_size0': 5, 'stride_size0': 5, 'dropout0': 0.2} + 1/39 [..............................] - ETA: 9s 23/39 [================>.............] - ETA: 0s 39/39 [==============================] - 0s 2ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-17.0-20.0 +train +(35920, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi7.0-10.0-12.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 3, 'filter_unit0': 64, 'filter_unit1': 64, 'filter_unit2': 256, 'kernel_size0': 3, 'kernel_size1': 1, 'kernel_size2': 5, 'pool_size0': 4, 'pool_size1': 5, 'pool_size2': 1, 'stride_size0': 5, 'stride_size1': 1, 'stride_size2': 1, 'dropout0': 0.4, 'dropout1': 0.2, 'dropout2': 0.1} + 1/39 [..............................] - ETA: 23s 20/39 [==============>...............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 4ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi7.0-10.0-15.0-17.0-20.0 +train +(35920, 11) +test +(364536, 10) +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi7.0-10.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 2, 'filter_unit0': 64, 'filter_unit1': 32, 'kernel_size0': 1, 'kernel_size1': 4, 'pool_size0': 5, 'pool_size1': 2, 'stride_size0': 4, 'stride_size1': 1, 'dropout0': 0.2, 'dropout1': 0.0} + 1/39 [..............................] - ETA: 16s 20/39 [==============>...............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi7.0-12.0-15.0-17.0-20.0 +train +(35920, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (115, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi7.0-12.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 2, 'filter_unit0': 64, 'filter_unit1': 128, 'kernel_size0': 3, 'kernel_size1': 5, 'pool_size0': 4, 'pool_size1': 4, 'stride_size0': 3, 'stride_size1': 3, 'dropout0': 0.0, 'dropout1': 0.0} + 1/39 [..............................] - ETA: 17s 21/39 [===============>..............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +imu-bvp_rr_Pilot02_id1_combi10.0-12.0-15.0-17.0-20.0 +train +(35920, 11) +test +(364536, 10) +---CNN1D--- +input shape: (1440, 7) +x shape: (120, 1440, 7) +Reloading Tuner from /projects/CIBCIGroup/00DataUploading/rqchia/aria-respiration-cal/subject_specific/Pilot02/imu-bvp_rr/01/cnn1d_imu-bvp_rr_Pilot02_id1_combi10.0-12.0-15.0-17.0-20.0/bayesianoptimization/tuner0.json +{'n_layers': 2, 'filter_unit0': 64, 'filter_unit1': 32, 'kernel_size0': 3, 'kernel_size1': 4, 'pool_size0': 1, 'pool_size1': 5, 'stride_size0': 4, 'stride_size1': 3, 'dropout0': 0.30000000000000004, 'dropout1': 0.4} + 1/39 [..............................] - ETA: 16s 22/39 [===============>..............] - ETA: 0s 39/39 [==============================] - ETA: 0s 39/39 [==============================] - 1s 3ms/step + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +585 Pilot02 3 elastic ... -0.963534 0.021076 0.457296 +586 Pilot02 3 elastic ... -0.832011 0.014414 0.611245 +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 + +[590 rows x 18 columns] +Namespace(data_input='imu-bvp', feature_method='None', lbl_str='pss', model='cnn1d', overwrite=0, subject=2, test_standing=1, train_len=5, win_shift=0.2, win_size=12) +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.21 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.22 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.23 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.24 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.25 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.26 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.27 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.28 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +WARNING:tensorflow:Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +Detecting that an object or model or tf.train.Checkpoint is being deleted with unrestored values. See the following logs for the specific values in question. To silence these warnings, use `status.expect_partial()`. See https://www.tensorflow.org/api_docs/python/tf/train/Checkpoint#restorefor details about the status object returned by the restore function. +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.1 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.2 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.3 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.4 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.5 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.6 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.7 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.8 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.9 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.10 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.11 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.12 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.13 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.14 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.15 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.16 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.17 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.18 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.19 +WARNING:tensorflow:Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 +Value in checkpoint could not be found in the restored object: (root).optimizer._variables.20 diff --git a/logs/singularity_4028191.out b/logs/singularity_4028191.out new file mode 100644 index 0000000..02ed2c6 --- /dev/null +++ b/logs/singularity_4028191.out @@ -0,0 +1,767 @@ +2023-11-28 11:24:59.096335: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations. +To enable the following instructions: AVX2 AVX512F FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags. +Using TensorFlow backend +Namespace(data_input='imu-bvp', feature_method='minirocket', lbl_str='pss', model='ard', overwrite=0, subject=2, test_standing=1, train_len=5, win_shift=0.2, win_size=12) +Using pre-set data id: 0 +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-12.0-15.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +587 Pilot02 3 elastic ... -0.777954 0.006047 0.831128 +588 Pilot02 3 elastic ... -4.740700 0.001226 0.965517 +589 Pilot02 3 elastic ... -0.478754 -0.043455 0.125258 +590 Pilot03 0 ard ... -2.132250 -0.030804 0.335888 +591 Pilot02 0 ard ... -4.077427 0.064294 0.023235 + +[592 rows x 18 columns] +QStandardPaths: XDG_RUNTIME_DIR points to non-existing path '/run/user/56779', please create it with 0700 permissions. +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-12.0-17.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +589 Pilot02 3 elastic ... -0.478754 -0.043455 1.252578e-01 +590 Pilot03 0 ard ... -2.132250 -0.030804 3.358884e-01 +591 Pilot02 0 ard ... -4.077427 0.064294 2.323462e-02 +592 Pilot03 0 ard ... -3.425517 -0.064052 4.521989e-02 +593 Pilot02 0 ard ... -10.781425 0.157570 2.252345e-08 + +[594 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-12.0-20.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +592 Pilot03 0 ard ... -3.425517 -0.064052 4.521989e-02 +593 Pilot02 0 ard ... -10.781425 0.157570 2.252345e-08 +594 Pilot03 0 ard ... -2.288029 -0.161926 3.560296e-07 +595 Pilot03 0 ard ... -4.288878 -0.062862 4.937947e-02 +596 Pilot02 0 ard ... -5.979400 0.116184 3.940064e-05 + +[597 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-15.0-17.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 3.649402e-01 +1 Pilot02 0 linreg ... -11.875765 0.070097 1.011711e-01 +2 Pilot02 0 linreg ... -11.069278 0.047023 2.718220e-01 +3 Pilot02 0 linreg ... -25.345517 0.016892 6.931765e-01 +4 Pilot02 0 linreg ... -15.299470 0.118749 5.380273e-03 +.. ... ... ... ... ... ... ... +594 Pilot03 0 ard ... -2.288029 -0.161926 3.560296e-07 +595 Pilot03 0 ard ... -4.288878 -0.062862 4.937947e-02 +596 Pilot02 0 ard ... -5.979400 0.116184 3.940064e-05 +597 Pilot03 0 ard ... -3.718349 0.022220 4.876224e-01 +598 Pilot02 0 ard ... -9.467720 0.128383 5.466853e-06 + +[599 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-15.0-20.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +596 Pilot02 0 ard ... -5.979400 0.116184 0.000039 +597 Pilot03 0 ard ... -3.718349 0.022220 0.487622 +598 Pilot02 0 ard ... -9.467720 0.128383 0.000005 +599 Pilot03 0 ard ... -2.929493 -0.081395 0.010883 +600 Pilot02 0 ard ... -2.573563 -0.029604 0.296408 + +[601 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-10.0-17.0-20.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +599 Pilot03 0 ard ... -2.929493 -0.081395 0.010883 +600 Pilot02 0 ard ... -2.573563 -0.029604 0.296408 +601 Pilot03 0 ard ... -1.971946 -0.147921 0.000003 +602 Pilot03 0 ard ... -3.705609 -0.005145 0.872339 +603 Pilot02 0 ard ... -3.621093 0.101044 0.000354 + +[604 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-12.0-15.0-17.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +adding new entry + subject config_id mdl_str ... r2 pearsonr_coeff pearsonr_pval +0 Pilot02 0 linreg ... -9.864563 0.038776 0.364940 +1 Pilot02 0 linreg ... -11.875765 0.070097 0.101171 +2 Pilot02 0 linreg ... -11.069278 0.047023 0.271822 +3 Pilot02 0 linreg ... -25.345517 0.016892 0.693177 +4 Pilot02 0 linreg ... -15.299470 0.118749 0.005380 +.. ... ... ... ... ... ... ... +601 Pilot03 0 ard ... -1.971946 -0.147921 0.000003 +602 Pilot03 0 ard ... -3.705609 -0.005145 0.872339 +603 Pilot02 0 ard ... -3.621093 0.101044 0.000354 +604 Pilot03 0 ard ... -2.325423 -0.022527 0.481634 +605 Pilot02 0 ard ... -6.231645 0.127397 0.000006 + +[606 rows x 18 columns] +imu-bvp_rr_Pilot02_id0_combi5.0-7.0-12.0-15.0-20.0 +train +(35921, 11) +test +(364536, 10) +minirocket transforming... +---ARD--- +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) +/usr/local/lib/python3.8/dist-packages/sklearn/linear_model/_bayes.py:53: FutureWarning: 'n_iter' was renamed to 'max_iter' in version 1.3 and will be removed in 1.5 + warnings.warn( +/usr/local/lib/python3.8/dist-packages/sklearn/utils/validation.py:1184: DataConversionWarning: A column-vector y was passed when a 1d array was expected. Please change the shape of y to (n_samples, ), for example using ravel(). + y = column_or_1d(y, warn=True) diff --git a/modules/__pycache__/digitalsignalprocessing.cpython-38.pyc b/modules/__pycache__/digitalsignalprocessing.cpython-38.pyc index d945ad7ecb679cd424f019071cad0fa8b6368f90..cbd6bb34c2066488d75b0894e6ef05efcee99b3a 100644 GIT binary patch delta 2920 zcmZ`)dvKIj72o^qx0{e<(~t*C-n<NK9-9qMliKh|oA8jRq?IJJlWg|;HrbGDlDl6d z)TDF(rw<HCJhiqsEu|GkL~vj`c8X3Rgkl{PTg%kWSH*TZ1sTvjoGKmrhv#<}2{YDj z=Kk)v=bU@)dED>Z%NNBzFADE{UT>O%ztVTY=G26@Py|nu4T=rM!iZ*k$tc+)TJJIz z8H@KgT5AozQOffwqs%Dhd9^WN1dK}7SYrf@D(0*;mKaNUt}~Vy%Xz-rSYfP8{8czT zJFk2@`*_294?eLf?8Ip|zZ9O`JnDGF*D_cROAI@9i(xUW8Di8q;<U7G=dj~B{h-6p zhMnw`)6fikR3FhT*RVb;c5C-*Bd!tmuxr>I(V857SEFB(<!sB=B2o$_<lPS1>ivc{ z#dgM{ok}J<=tXa1YNp5&=|Xl>TKaC$o7k70B7~KA@{V!Q5QBvoW^Az6lp)LXd*pJM zf??SQS*j7TLTx=}O!k8}0FV%9LqQ%@JeJ5fP5QFv;aRK2Lo_+-ihDb>hUj=^Ts%VW zWtCH7R;}1YqghR2jMrcFJPL)!0N+(xH)byu<78zIi*59A_PF~g7KNSkasC`Skn`x5 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EvalHandler(): def save_eval_history(self): self.eval_hist.to_csv(self.eval_history_file, index=False) +# save evaluation metrics in single file that handles the models for the +# subject and config +class DSPEvalHandler(): + """ + Handles the evaluation metric for each subject and DSP sensor. + ... + + Attributes + ---------- + y_true : numpy.ndarray + a numpy array of the respiration rate ground truth values from the + bioharness + y_pred : numpy.ndarray + a numpy array of the predicted respiration rate + subject : str + the subject in format Pilot01, S01 etc. + pfh : ProjectFileHandler + custom class detailing the directories, metafile, and configurations + sens_str : str + a string to inform what sensor was used + overwrite : bool + overwrites the evaluations (default False) + + Methods + ------- + load_eval_history() + loads the evaluation file + save_eval_history() + saves the evaluation file + update_eval_history() + updates the evaluation file using the new entry if there is no matching + model or configuration for the given subject + """ + def __init__(self, y_true, y_pred, subject, pfh, sens_str, overwrite=False): + self.subject = subject + self.config = pfh.config + self.parent_directory = join(DATA_DIR, 'subject_specific') + self.fset_id = pfh.fset_id + self.sens_str = sens_str + self.overwrite = overwrite + + self.evals = Evaluation(y_true, y_pred) + + entry = {'subject': self.subject, + 'config_id': self.fset_id, + 'sens_str': self.sens_str, + } + self.entry = {**entry, **self.config, **self.evals.get_evals()} + + self.eval_history_file = join(self.parent_directory, + 'dsp_eval_history.csv') + self.eval_hist = self.load_eval_history() + + def load_eval_history(self): + if not exists(self.eval_history_file): + return None + else: + return pd.read_csv(self.eval_history_file) + + def update_eval_history(self): + eval_hist = self.eval_hist + if eval_hist is None: + eval_hist = pd.DataFrame([self.entry]) + else: + index_list = eval_hist[ + (eval_hist['subject'] == self.entry['subject']) &\ + (eval_hist['config_id'] == self.entry['config_id']) &\ + (eval_hist['sens_str'] == self.entry['sens_str']) + ].index.tolist() + if len(index_list) == 0: + print("adding new entry") + eval_hist = eval_hist._append(self.entry, ignore_index=True) + elif index_list is not None and self.overwrite: + eval_hist.loc[index_list[0]] = self.entry + self.eval_hist = eval_hist + + def save_eval_history(self): + self.eval_hist.to_csv(self.eval_history_file, index=False) + def imu_rr_dsp(subject, window_size=12, window_shift=0.2, @@ -1049,35 +1128,39 @@ def imu_rr_dsp(subject, window_size=window_size, window_shift=window_shift, fs=fs, - cols=['gyr_x', 'gyr_y', 'gyr_z']) + cols=['gyro_x', 'gyro_y', 'gyro_z']) acc_evals = Evaluation(acc_y_dsp_df[lbl_str], acc_dsp_df['pred']) gyr_evals = Evaluation(gyr_y_dsp_df[lbl_str], gyr_dsp_df['pred']) print("acc evals: \n", acc_evals.get_evals()) print("gyr evals: \n", gyr_evals.get_evals()) - plt.subplot(211) - plt.plot(acc_y_dsp_df[lbl_str]); plt.plot(acc_dsp_df['pred']) - plt.subplot(212) - plt.plot(gyr_y_dsp_df[lbl_str]); plt.plot(gyr_dsp_df['pred']) - plt.show() - - # TODO - eval_handle = DSPEvalHandler(y_test.flatten(), preds.flatten(), subject, - pfh, None, overwrite=overwrite) - eval_handle.update_eval_history() - eval_handle.save_eval_history() + + acc_eval = DSPEvalHandler(acc_evals.y_true.values.flatten(), + acc_evals.y_pred.values.flatten(), + subject, + pfh, 'acc', overwrite=overwrite) + acc_eval.update_eval_history() + acc_eval.save_eval_history() + + gyr_eval = DSPEvalHandler(gyr_evals.y_true.values.flatten(), + gyr_evals.y_pred.values.flatten(), + subject, + pfh, 'gyro', overwrite=overwrite) + gyr_eval.update_eval_history() + gyr_eval.save_eval_history() pp = PrettyPrinter() - pp.pprint(eval_handle.load_eval_history()) - - fig, ax = plt.subplots() - fig_title = '_'.join([mdl_str, subject]+[combi_str]) - ax.plot(y_test) - ax.plot(preds) - ax.set_title(fig_title) - ax.legend([lbl_str, 'pred']) + pp.pprint(acc_eval.load_eval_history()) + + fig, ax = plt.subplots(2, 1) + ax[0].plot(acc_y_dsp_df[lbl_str]); plt.plot(acc_dsp_df['pred']) + ax[0].set_title("ACC") + ax[1].plot(gyr_y_dsp_df[lbl_str]); plt.plot(gyr_dsp_df['pred']) + ax[1].set_title("GYRO") + ax[1].legend([lbl_str, 'estimate']) fig_dir = join(project_dir, 'figures') if not exists(fig_dir): mkdir(fig_dir) + fig_title = '_'.join([subject, 'dsp']) fig.savefig(join(fig_dir, fig_title+".png")) plt.close() @@ -1340,7 +1423,7 @@ def arg_parser(): ) parser.add_argument("-s", '--subject', type=int, default=2, - choices=list(range(1,4))+[-1], + choices=list(range(1,5))+[-1], ) parser.add_argument("-f", '--feature_method', type=str, default='minirocket', @@ -1371,12 +1454,18 @@ def arg_parser(): help='1 or 0 input, choose if standing data will be '\ 'recorded or not' ) + parser.add_argument('--method', type=str, + default='ml', + help="choose between 'ml' or 'dsp' methods for"\ + " regression", + choices=['ml', 'dsp'] + ) args = parser.parse_args() return args if __name__ == '__main__': np.random.seed(100) - n_subject_max = 3 + n_subject_max = 4 args = arg_parser() # Load command line arguments @@ -1390,13 +1479,14 @@ if __name__ == '__main__': overwrite = args.overwrite data_input = args.data_input test_standing = args.test_standing + method = args.method print(args) assert train_len>0,"--train_len must be an integer greater than 0" subject_pre_string = 'Pilot' - if subject > 0: + if subject > 0 and method == 'ml': subject = subject_pre_string+str(subject).zfill(2) sens_rr_model(subject, @@ -1410,7 +1500,36 @@ if __name__ == '__main__': test_standing=test_standing, data_input=data_input, ) - else: + elif subject <= 0 and method == 'ml': + subjects = [subject_pre_string+str(i).zfill(2) for i in \ + range(2, n_subject_max+1)] + + rr_func = partial(sens_rr_model, + window_size=window_size, + window_shift=window_shift, + lbl_str=lbl_str, + mdl_str=mdl_str, + overwrite=overwrite, + feature_method=feature_method, + train_len=train_len, + test_standing=test_standing, + data_input=data_input, + ) + + for subject in subjects: + rr_func(subject) + + if subject > 0 and method == 'dsp': + subject = subject_pre_string+str(subject).zfill(2) + imu_rr_dsp(subject, + window_size=window_size, + window_shift=window_shift, + lbl_str=lbl_str, + overwrite=overwrite, + train_len=train_len, + test_standing=test_standing) + + elif subject <= 0 and method == 'ml': subjects = [subject_pre_string+str(i).zfill(2) for i in \ range(2, n_subject_max+1)] -- GitLab